Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX4O95219 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SNX4O95219 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX4O95219 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SNX4O95219 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX4O95219 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX4O95219 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.65■□□□□ 0.42
SNX4O95219 AC004951.3-201ENST00000418645 1148 ntBASIC17.65■□□□□ 0.42
SNX4O95219 RBM17P1-201ENST00000453646 1190 ntBASIC17.65■□□□□ 0.42
SNX4O95219 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.65■□□□□ 0.42
SNX4O95219 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.65■□□□□ 0.42
SNX4O95219 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SNX4O95219 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SNX4O95219 AC130371.2-201ENST00000619443 611 ntBASIC17.65■□□□□ 0.42
SNX4O95219 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX4O95219 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX4O95219 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SNX4O95219 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SNX4O95219 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 PCDHB18P-201ENST00000524813 2368 ntBASIC17.64■□□□□ 0.41
SNX4O95219 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.64■□□□□ 0.41
SNX4O95219 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SNX4O95219 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX4O95219 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.64■□□□□ 0.41
SNX4O95219 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX4O95219 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 RCC2P6-201ENST00000526625 1557 ntBASIC17.64■□□□□ 0.41
SNX4O95219 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.64■□□□□ 0.41
SNX4O95219 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SNX4O95219 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SNX4O95219 AC135050.7-201ENST00000624508 2218 ntBASIC17.64■□□□□ 0.41
SNX4O95219 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
SNX4O95219 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SNX4O95219 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX4O95219 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNX4O95219 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 MESTP1-201ENST00000404287 994 ntBASIC17.63■□□□□ 0.41
SNX4O95219 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 AC011506.1-201ENST00000474329 610 ntBASIC17.63■□□□□ 0.41
SNX4O95219 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX4O95219 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.63■□□□□ 0.41
SNX4O95219 AC011298.2-201ENST00000617989 482 ntBASIC17.63■□□□□ 0.41
SNX4O95219 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX4O95219 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SNX4O95219 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.63■□□□□ 0.41
SNX4O95219 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SNX4O95219 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.63■□□□□ 0.41
SNX4O95219 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SNX4O95219 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms