Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.5■□□□□ 0.23
KDM4BO94953 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.5■□□□□ 0.23
KDM4BO94953 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.5■□□□□ 0.23
KDM4BO94953 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KDM4BO94953 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KDM4BO94953 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.5■□□□□ 0.23
KDM4BO94953 AP006587.1-201ENST00000534129 1502 ntBASIC16.5■□□□□ 0.23
KDM4BO94953 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KDM4BO94953 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.5■□□□□ 0.23
KDM4BO94953 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM4BO94953 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
KDM4BO94953 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KDM4BO94953 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM4BO94953 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.49■□□□□ 0.23
KDM4BO94953 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM4BO94953 AC098934.4-201ENST00000564127 592 ntBASIC16.49■□□□□ 0.23
KDM4BO94953 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.49■□□□□ 0.23
KDM4BO94953 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM4BO94953 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.49■□□□□ 0.23
KDM4BO94953 AL109923.1-201ENST00000618799 583 ntBASIC16.49■□□□□ 0.23
KDM4BO94953 AC133041.1-202ENST00000642053 222 ntBASIC16.49■□□□□ 0.23
KDM4BO94953 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.49■□□□□ 0.23
KDM4BO94953 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KDM4BO94953 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 IRX1P1-201ENST00000438849 1838 ntBASIC16.48■□□□□ 0.23
KDM4BO94953 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.48■□□□□ 0.23
KDM4BO94953 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.48■□□□□ 0.23
KDM4BO94953 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.48■□□□□ 0.23
KDM4BO94953 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.48■□□□□ 0.23
KDM4BO94953 AC120498.8-201ENST00000614275 531 ntBASIC16.48■□□□□ 0.23
KDM4BO94953 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KDM4BO94953 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KDM4BO94953 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KDM4BO94953 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KDM4BO94953 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
KDM4BO94953 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
KDM4BO94953 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
KDM4BO94953 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms