Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CLDN11O75508 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 MIR1224-201ENST00000408193 85 ntBASIC19.2■□□□□ 0.66
CLDN11O75508 TSPY5P-201ENST00000426936 936 ntBASIC19.2■□□□□ 0.66
CLDN11O75508 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN11O75508 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN11O75508 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.2■□□□□ 0.66
CLDN11O75508 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN11O75508 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.2■□□□□ 0.66
CLDN11O75508 AL023973.1-201ENST00000624619 620 ntBASIC19.2■□□□□ 0.66
CLDN11O75508 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CLDN11O75508 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
CLDN11O75508 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CLDN11O75508 KRT8P7-201ENST00000533003 1432 ntBASIC19.19■□□□□ 0.66
CLDN11O75508 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN11O75508 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN11O75508 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CLDN11O75508 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CLDN11O75508 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.19■□□□□ 0.66
CLDN11O75508 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.19■□□□□ 0.66
CLDN11O75508 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CLDN11O75508 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.19■□□□□ 0.66
CLDN11O75508 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CLDN11O75508 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN11O75508 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 AC063952.2-201ENST00000498792 1227 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 AL441883.1-201ENST00000566170 1045 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.18■□□□□ 0.66
CLDN11O75508 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN11O75508 AC010331.1-201ENST00000611423 582 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 AL590326.2-201ENST00000625139 305 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.18■□□□□ 0.66
CLDN11O75508 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLDN11O75508 AC034236.2-201ENST00000606662 1610 ntBASIC19.18■□□□□ 0.66
CLDN11O75508 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CLDN11O75508 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN11O75508 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.17■□□□□ 0.66
CLDN11O75508 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CLDN11O75508 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.17■□□□□ 0.66
CLDN11O75508 MTMR9LP-203ENST00000426597 1545 ntBASIC19.17■□□□□ 0.66
CLDN11O75508 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.17■□□□□ 0.66
CLDN11O75508 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.17■□□□□ 0.66
CLDN11O75508 LINC01238-205ENST00000567549 1107 ntBASIC19.17■□□□□ 0.66
CLDN11O75508 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.17■□□□□ 0.66
CLDN11O75508 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLDN11O75508 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.17■□□□□ 0.66
CLDN11O75508 AC112497.1-201ENST00000624824 639 ntBASIC19.17■□□□□ 0.66
CLDN11O75508 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms