Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM13O60858 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM13O60858 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM13O60858 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 NBPF21P-201ENST00000425093 1451 ntBASIC18.52■□□□□ 0.56
TRIM13O60858 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
TRIM13O60858 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM13O60858 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM13O60858 POM121L13P-201ENST00000422362 380 ntBASIC18.52■□□□□ 0.56
TRIM13O60858 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM13O60858 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM13O60858 KRT8P41-201ENST00000533985 1514 ntBASIC18.52■□□□□ 0.56
TRIM13O60858 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM13O60858 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM13O60858 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRIM13O60858 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM13O60858 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM13O60858 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.52■□□□□ 0.55
TRIM13O60858 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM13O60858 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM13O60858 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM13O60858 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM13O60858 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM13O60858 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIM13O60858 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM13O60858 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TRIM13O60858 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM13O60858 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM13O60858 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.5■□□□□ 0.55
TRIM13O60858 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM13O60858 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM13O60858 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM13O60858 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM13O60858 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM13O60858 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM13O60858 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM13O60858 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM13O60858 AC004264.1-201ENST00000608354 794 ntBASIC18.5■□□□□ 0.55
TRIM13O60858 AC133041.1-202ENST00000642053 222 ntBASIC18.5■□□□□ 0.55
TRIM13O60858 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.5■□□□□ 0.55
TRIM13O60858 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM13O60858 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM13O60858 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM13O60858 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM13O60858 MTMR9LP-203ENST00000426597 1545 ntBASIC18.49■□□□□ 0.55
TRIM13O60858 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
TRIM13O60858 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM13O60858 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM13O60858 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRIM13O60858 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM13O60858 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM13O60858 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM13O60858 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM13O60858 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM13O60858 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM13O60858 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 AC068587.9-201ENST00000641814 219 ntBASIC18.49■□□□□ 0.55
TRIM13O60858 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM13O60858 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM13O60858 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms