Protein–RNA interactions for Protein: O60671

RAD1, Cell cycle checkpoint protein RAD1, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD1O60671 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAD1O60671 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RAD1O60671 NPAP1P7-201ENST00000613027 823 ntBASIC17.81■□□□□ 0.44
RAD1O60671 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 AC036111.1-201ENST00000533973 1582 ntBASIC17.81■□□□□ 0.44
RAD1O60671 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RAD1O60671 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RAD1O60671 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
RAD1O60671 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD1O60671 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAD1O60671 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.8■□□□□ 0.44
RAD1O60671 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.8■□□□□ 0.44
RAD1O60671 AL023284.2-201ENST00000405850 579 ntBASIC17.8■□□□□ 0.44
RAD1O60671 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.8■□□□□ 0.44
RAD1O60671 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RAD1O60671 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.8■□□□□ 0.44
RAD1O60671 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 SDHAP1-207ENST00000440850 2000 ntBASIC17.8■□□□□ 0.44
RAD1O60671 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RAD1O60671 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.79■□□□□ 0.44
RAD1O60671 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 MCCD1P1-208ENST00000445732 328 ntBASIC17.79■□□□□ 0.44
RAD1O60671 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.79■□□□□ 0.44
RAD1O60671 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RAD1O60671 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RAD1O60671 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.79■□□□□ 0.44
RAD1O60671 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RAD1O60671 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RAD1O60671 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD1O60671 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD1O60671 MIR3180-5-201ENST00000583743 153 ntBASIC17.78■□□□□ 0.44
RAD1O60671 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.78■□□□□ 0.44
RAD1O60671 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.78■□□□□ 0.44
RAD1O60671 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RAD1O60671 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD1O60671 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.78■□□□□ 0.44
RAD1O60671 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RAD1O60671 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RAD1O60671 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms