Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.36■□□□□ 0.69
TSPAN3O60637 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 LINC01238-205ENST00000567549 1107 ntBASIC19.36■□□□□ 0.69
TSPAN3O60637 MIR3180-5-201ENST00000583743 153 ntBASIC19.36■□□□□ 0.69
TSPAN3O60637 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
TSPAN3O60637 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TSPAN3O60637 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TSPAN3O60637 AL161938.1-201ENST00000569833 2180 ntBASIC19.36■□□□□ 0.69
TSPAN3O60637 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TSPAN3O60637 AC008556.1-201ENST00000610908 2040 ntBASIC19.35■□□□□ 0.69
TSPAN3O60637 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.35■□□□□ 0.69
TSPAN3O60637 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TSPAN3O60637 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TSPAN3O60637 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.35■□□□□ 0.69
TSPAN3O60637 FAM8A6P-201ENST00000407496 1135 ntBASIC19.35■□□□□ 0.69
TSPAN3O60637 KRT18P38-201ENST00000449496 1282 ntBASIC19.35■□□□□ 0.69
TSPAN3O60637 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.35■□□□□ 0.69
TSPAN3O60637 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.35■□□□□ 0.69
TSPAN3O60637 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.35■□□□□ 0.69
TSPAN3O60637 NEK4P2-201ENST00000580004 1012 ntBASIC19.35■□□□□ 0.69
TSPAN3O60637 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TSPAN3O60637 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.35■□□□□ 0.69
TSPAN3O60637 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.35■□□□□ 0.69
TSPAN3O60637 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TSPAN3O60637 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TSPAN3O60637 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.34■□□□□ 0.69
TSPAN3O60637 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.34■□□□□ 0.69
TSPAN3O60637 AP000523.1-201ENST00000398242 1049 ntBASIC19.34■□□□□ 0.69
TSPAN3O60637 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TSPAN3O60637 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.34■□□□□ 0.69
TSPAN3O60637 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 AC024243.1-201ENST00000609234 778 ntBASIC19.34■□□□□ 0.69
TSPAN3O60637 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.34■□□□□ 0.69
TSPAN3O60637 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
TSPAN3O60637 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.34■□□□□ 0.69
TSPAN3O60637 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TSPAN3O60637 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.33■□□□□ 0.69
TSPAN3O60637 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.33■□□□□ 0.69
TSPAN3O60637 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.33■□□□□ 0.69
TSPAN3O60637 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.33■□□□□ 0.69
TSPAN3O60637 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TSPAN3O60637 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.33■□□□□ 0.68
TSPAN3O60637 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.33■□□□□ 0.68
TSPAN3O60637 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.33■□□□□ 0.68
TSPAN3O60637 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TSPAN3O60637 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.33■□□□□ 0.68
TSPAN3O60637 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TSPAN3O60637 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms