Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNT1O60563 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNT1O60563 AC012306.2-201ENST00000609350 630 ntBASIC21.33■■□□□ 1.01
CCNT1O60563 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCNT1O60563 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.33■■□□□ 1.01
CCNT1O60563 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNT1O60563 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.33■■□□□ 1
CCNT1O60563 AL109659.2-201ENST00000606809 1674 ntBASIC21.33■■□□□ 1
CCNT1O60563 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.33■■□□□ 1
CCNT1O60563 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCNT1O60563 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCNT1O60563 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CCNT1O60563 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.32■■□□□ 1
CCNT1O60563 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.32■■□□□ 1
CCNT1O60563 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
CCNT1O60563 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 AC097493.4-201ENST00000641197 219 ntBASIC21.32■■□□□ 1
CCNT1O60563 MTMR9LP-203ENST00000426597 1545 ntBASIC21.32■■□□□ 1
CCNT1O60563 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.32■■□□□ 1
CCNT1O60563 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNT1O60563 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNT1O60563 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCNT1O60563 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CCNT1O60563 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
CCNT1O60563 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.31■■□□□ 1
CCNT1O60563 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.31■■□□□ 1
CCNT1O60563 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.31■■□□□ 1
CCNT1O60563 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.31■■□□□ 1
CCNT1O60563 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.31■■□□□ 1
CCNT1O60563 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCNT1O60563 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNT1O60563 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CCNT1O60563 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.3■■□□□ 1
CCNT1O60563 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.3■■□□□ 1
CCNT1O60563 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.3■■□□□ 1
CCNT1O60563 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.3■■□□□ 1
CCNT1O60563 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCNT1O60563 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
CCNT1O60563 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
CCNT1O60563 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.3■■□□□ 1
CCNT1O60563 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCNT1O60563 AL357033.4-201ENST00000617703 1807 ntBASIC21.29■■□□□ 1
CCNT1O60563 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 HMGA1P5-201ENST00000412453 271 ntBASIC21.29■■□□□ 1
CCNT1O60563 ECEL1P3-201ENST00000427961 737 ntBASIC21.29■■□□□ 1
CCNT1O60563 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.29■■□□□ 1
CCNT1O60563 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.29■■□□□ 1
CCNT1O60563 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.29■■□□□ 1
CCNT1O60563 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.29■■□□□ 1
CCNT1O60563 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.29■■□□□ 1
CCNT1O60563 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.29■■□□□ 1
CCNT1O60563 LINC01023-201ENST00000606054 436 ntBASIC21.29■■□□□ 1
CCNT1O60563 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.29■■□□□ 1
CCNT1O60563 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.29■■□□□ 1
CCNT1O60563 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.29■■□□□ 1
CCNT1O60563 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.29■■□□□ 1
CCNT1O60563 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 KRT8P45-201ENST00000414328 1447 ntBASIC21.29■■□□□ 1
CCNT1O60563 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CCNT1O60563 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
CCNT1O60563 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 AL031598.1-201ENST00000561511 1773 ntBASIC21.28■■□□□ 1
CCNT1O60563 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCNT1O60563 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.28■■□□□ 1
CCNT1O60563 AC036111.1-201ENST00000533973 1582 ntBASIC21.28■■□□□ 1
CCNT1O60563 AC093525.10-201ENST00000625130 1569 ntBASIC21.28■■□□□ 1
CCNT1O60563 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.28■■□□□ 1
CCNT1O60563 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms