Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
ZIC3O60481 AL357033.4-201ENST00000617703 1807 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 MTMR9LP-203ENST00000426597 1545 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZIC3O60481 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 AP000523.1-201ENST00000398242 1049 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ZIC3O60481 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.91■□□□□ 0.3
ZIC3O60481 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.91■□□□□ 0.3
ZIC3O60481 AC063952.2-201ENST00000498792 1227 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.91■□□□□ 0.3
ZIC3O60481 AC010331.1-201ENST00000611423 582 ntBASIC16.91■□□□□ 0.3
ZIC3O60481 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ZIC3O60481 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ZIC3O60481 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ZIC3O60481 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
ZIC3O60481 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.9■□□□□ 0.3
ZIC3O60481 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.9■□□□□ 0.3
ZIC3O60481 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.9■□□□□ 0.3
ZIC3O60481 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.9■□□□□ 0.3
ZIC3O60481 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.9■□□□□ 0.3
ZIC3O60481 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.9■□□□□ 0.3
ZIC3O60481 GCSHP2-201ENST00000560971 527 ntBASIC16.9■□□□□ 0.3
ZIC3O60481 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZIC3O60481 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.9■□□□□ 0.3
ZIC3O60481 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ZIC3O60481 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.9■□□□□ 0.3
ZIC3O60481 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ZIC3O60481 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.9■□□□□ 0.3
ZIC3O60481 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZIC3O60481 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ZIC3O60481 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
ZIC3O60481 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
ZIC3O60481 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
ZIC3O60481 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.89■□□□□ 0.29
ZIC3O60481 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.89■□□□□ 0.29
ZIC3O60481 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.89■□□□□ 0.29
ZIC3O60481 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.89■□□□□ 0.29
ZIC3O60481 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.89■□□□□ 0.29
ZIC3O60481 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ZIC3O60481 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ZIC3O60481 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ZIC3O60481 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.88■□□□□ 0.29
ZIC3O60481 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZIC3O60481 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ZIC3O60481 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ZIC3O60481 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.88■□□□□ 0.29
ZIC3O60481 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms