Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 YBX1P2-201ENST00000489612 999 ntBASIC18.44■□□□□ 0.54
VEGFDO43915 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.44■□□□□ 0.54
VEGFDO43915 AC139887.4-201ENST00000607877 719 ntBASIC18.44■□□□□ 0.54
VEGFDO43915 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VEGFDO43915 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VEGFDO43915 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VEGFDO43915 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VEGFDO43915 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
VEGFDO43915 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VEGFDO43915 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
VEGFDO43915 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
VEGFDO43915 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
VEGFDO43915 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 RNF152P1-201ENST00000397754 604 ntBASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
VEGFDO43915 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.43■□□□□ 0.54
VEGFDO43915 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.43■□□□□ 0.54
VEGFDO43915 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VEGFDO43915 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.43■□□□□ 0.54
VEGFDO43915 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.43■□□□□ 0.54
VEGFDO43915 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 AC034236.2-201ENST00000606662 1610 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 DUX4L26-201ENST00000489078 1255 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.42■□□□□ 0.54
VEGFDO43915 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.42■□□□□ 0.54
VEGFDO43915 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.42■□□□□ 0.54
VEGFDO43915 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 AC011558.1-201ENST00000623459 338 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 MTMR9LP-203ENST00000426597 1545 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VEGFDO43915 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
VEGFDO43915 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VEGFDO43915 AC006333.2-201ENST00000607957 2099 ntBASIC18.42■□□□□ 0.54
VEGFDO43915 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.41■□□□□ 0.54
VEGFDO43915 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 HOXB1-202ENST00000577092 1414 ntBASIC18.41■□□□□ 0.54
VEGFDO43915 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
VEGFDO43915 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
VEGFDO43915 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 TSPY5P-201ENST00000426936 936 ntBASIC18.41■□□□□ 0.54
VEGFDO43915 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.41■□□□□ 0.54
VEGFDO43915 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.41■□□□□ 0.54
VEGFDO43915 AL049597.2-201ENST00000565575 961 ntBASIC18.41■□□□□ 0.54
VEGFDO43915 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.41■□□□□ 0.54
VEGFDO43915 AL023973.1-201ENST00000624619 620 ntBASIC18.41■□□□□ 0.54
VEGFDO43915 AC112497.1-201ENST00000624824 639 ntBASIC18.41■□□□□ 0.54
VEGFDO43915 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.41■□□□□ 0.54
VEGFDO43915 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.41■□□□□ 0.54
VEGFDO43915 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VEGFDO43915 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms