Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PROM1O43490 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PROM1O43490 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.85■□□□□ 0.45
PROM1O43490 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PROM1O43490 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.85■□□□□ 0.45
PROM1O43490 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.85■□□□□ 0.45
PROM1O43490 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
PROM1O43490 AC093503.3-201ENST00000624917 2352 ntBASIC17.85■□□□□ 0.45
PROM1O43490 AC083906.6-201ENST00000641366 219 ntBASIC17.85■□□□□ 0.45
PROM1O43490 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PROM1O43490 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.84■□□□□ 0.45
PROM1O43490 AC211429.1-201ENST00000415277 523 ntBASIC17.84■□□□□ 0.45
PROM1O43490 TSPY15P-201ENST00000457163 923 ntBASIC17.84■□□□□ 0.45
PROM1O43490 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.84■□□□□ 0.45
PROM1O43490 FITM1-202ENST00000559294 800 ntBASIC17.84■□□□□ 0.45
PROM1O43490 AP000525.1-201ENST00000608286 694 ntBASIC17.84■□□□□ 0.45
PROM1O43490 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PROM1O43490 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PROM1O43490 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PROM1O43490 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.83■□□□□ 0.45
PROM1O43490 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
PROM1O43490 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PROM1O43490 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.83■□□□□ 0.45
PROM1O43490 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PROM1O43490 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
PROM1O43490 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PROM1O43490 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PROM1O43490 AL512353.2-201ENST00000448759 1962 ntBASIC17.83■□□□□ 0.44
PROM1O43490 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PROM1O43490 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PROM1O43490 CA15P1-201ENST00000481698 905 ntBASIC17.83■□□□□ 0.44
PROM1O43490 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.83■□□□□ 0.44
PROM1O43490 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PROM1O43490 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PROM1O43490 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
PROM1O43490 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PROM1O43490 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 KRT8P32-201ENST00000512863 1461 ntBASIC17.82■□□□□ 0.44
PROM1O43490 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
PROM1O43490 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.82■□□□□ 0.44
PROM1O43490 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 AC093525.10-201ENST00000625130 1569 ntBASIC17.82■□□□□ 0.44
PROM1O43490 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
PROM1O43490 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PROM1O43490 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.82■□□□□ 0.44
PROM1O43490 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.82■□□□□ 0.44
PROM1O43490 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.81■□□□□ 0.44
PROM1O43490 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PROM1O43490 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PROM1O43490 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PROM1O43490 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms