Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HDAC3O15379 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.31■□□□□ 0.52
HDAC3O15379 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.31■□□□□ 0.52
HDAC3O15379 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HDAC3O15379 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HDAC3O15379 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC3O15379 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
HDAC3O15379 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 SLC29A4P1-201ENST00000398760 971 ntBASIC18.3■□□□□ 0.52
HDAC3O15379 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.3■□□□□ 0.52
HDAC3O15379 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 SOX15-203ENST00000570788 1093 ntBASIC18.3■□□□□ 0.52
HDAC3O15379 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.3■□□□□ 0.52
HDAC3O15379 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.3■□□□□ 0.52
HDAC3O15379 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HDAC3O15379 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.29■□□□□ 0.52
HDAC3O15379 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
HDAC3O15379 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.29■□□□□ 0.52
HDAC3O15379 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 GUSBP6-202ENST00000438529 1198 ntBASIC18.29■□□□□ 0.52
HDAC3O15379 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 AC068587.9-201ENST00000641814 219 ntBASIC18.29■□□□□ 0.52
HDAC3O15379 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.29■□□□□ 0.52
HDAC3O15379 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HDAC3O15379 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.29■□□□□ 0.52
HDAC3O15379 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HDAC3O15379 BCL2-203ENST00000589955 5011 ntBASIC18.28■□□□□ 0.52
HDAC3O15379 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.28■□□□□ 0.52
HDAC3O15379 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC3O15379 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.28■□□□□ 0.52
HDAC3O15379 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 AC006970.2-201ENST00000450065 779 ntBASIC18.28■□□□□ 0.52
HDAC3O15379 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.28■□□□□ 0.52
HDAC3O15379 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.28■□□□□ 0.52
HDAC3O15379 C1QL1P1-201ENST00000568105 661 ntBASIC18.28■□□□□ 0.52
HDAC3O15379 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.28■□□□□ 0.52
HDAC3O15379 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 IKBKGP1-201ENST00000612193 1073 ntBASIC18.28■□□□□ 0.52
HDAC3O15379 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.28■□□□□ 0.52
HDAC3O15379 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
HDAC3O15379 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HDAC3O15379 ESPNP-201ENST00000270691 2015 ntBASIC18.28■□□□□ 0.52
HDAC3O15379 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HDAC3O15379 AC135776.1-201ENST00000319817 2481 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms