Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
PFDN6O15212 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PFDN6O15212 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 AC093503.3-201ENST00000624917 2352 ntBASIC18.84■□□□□ 0.61
PFDN6O15212 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.84■□□□□ 0.61
PFDN6O15212 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PFDN6O15212 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.84■□□□□ 0.61
PFDN6O15212 AC012618.2-201ENST00000428058 849 ntBASIC18.84■□□□□ 0.61
PFDN6O15212 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.84■□□□□ 0.61
PFDN6O15212 AC130371.2-201ENST00000619443 611 ntBASIC18.84■□□□□ 0.61
PFDN6O15212 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.84■□□□□ 0.61
PFDN6O15212 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.84■□□□□ 0.61
PFDN6O15212 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 AC093525.10-201ENST00000625130 1569 ntBASIC18.84■□□□□ 0.61
PFDN6O15212 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PFDN6O15212 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
PFDN6O15212 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PFDN6O15212 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.83■□□□□ 0.6
PFDN6O15212 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 FAM197Y1-201ENST00000421178 764 ntBASIC18.83■□□□□ 0.6
PFDN6O15212 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.83■□□□□ 0.6
PFDN6O15212 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.83■□□□□ 0.6
PFDN6O15212 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PFDN6O15212 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.83■□□□□ 0.6
PFDN6O15212 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PFDN6O15212 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.82■□□□□ 0.6
PFDN6O15212 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
PFDN6O15212 RPS2P55-201ENST00000397318 883 ntBASIC18.82■□□□□ 0.6
PFDN6O15212 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 AC098590.1-201ENST00000468126 897 ntBASIC18.82■□□□□ 0.6
PFDN6O15212 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
PFDN6O15212 AC107956.1-201ENST00000494359 873 ntBASIC18.82■□□□□ 0.6
PFDN6O15212 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.82■□□□□ 0.6
PFDN6O15212 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.82■□□□□ 0.6
PFDN6O15212 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PFDN6O15212 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 CROCCP3-202ENST00000420820 1947 ntBASIC18.82■□□□□ 0.6
PFDN6O15212 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
PFDN6O15212 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PFDN6O15212 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.82■□□□□ 0.6
PFDN6O15212 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PFDN6O15212 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PFDN6O15212 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PFDN6O15212 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PFDN6O15212 MIR718-201ENST00000390190 70 ntBASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms