Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC26.14■■□□□ 1.77
CHD2O14647 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CHD2O14647 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
CHD2O14647 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC26.13■■□□□ 1.77
CHD2O14647 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
CHD2O14647 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC26.13■■□□□ 1.77
CHD2O14647 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.13■■□□□ 1.77
CHD2O14647 TCF3P1-201ENST00000423021 1937 ntBASIC26.13■■□□□ 1.77
CHD2O14647 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.13■■□□□ 1.77
CHD2O14647 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CHD2O14647 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CHD2O14647 NMU-202ENST00000505262 693 ntTSL 3 BASIC26.13■■□□□ 1.77
CHD2O14647 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.13■■□□□ 1.77
CHD2O14647 PRKN-208ENST00000610470 531 ntTSL 2 BASIC26.13■■□□□ 1.77
CHD2O14647 PRKN-209ENST00000612485 225 ntTSL 5 BASIC26.13■■□□□ 1.77
CHD2O14647 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CHD2O14647 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
CHD2O14647 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC26.12■■□□□ 1.77
CHD2O14647 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC26.12■■□□□ 1.77
CHD2O14647 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC26.12■■□□□ 1.77
CHD2O14647 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CHD2O14647 AC006333.2-201ENST00000607957 2099 ntBASIC26.12■■□□□ 1.77
CHD2O14647 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CHD2O14647 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CHD2O14647 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD2O14647 AC011840.4-201ENST00000578471 627 ntBASIC26.11■■□□□ 1.77
CHD2O14647 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD2O14647 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD2O14647 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD2O14647 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC26.11■■□□□ 1.77
CHD2O14647 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC26.11■■□□□ 1.77
CHD2O14647 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD2O14647 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC26.11■■□□□ 1.77
CHD2O14647 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC26.11■■□□□ 1.77
CHD2O14647 AC140113.2-201ENST00000604370 208 ntBASIC26.11■■□□□ 1.77
CHD2O14647 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
CHD2O14647 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 AC114341.1-201ENST00000618070 349 ntBASIC26.11■■□□□ 1.77
CHD2O14647 AL355877.3-201ENST00000622820 899 ntBASIC26.11■■□□□ 1.77
CHD2O14647 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC26.11■■□□□ 1.77
CHD2O14647 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
CHD2O14647 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD2O14647 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD2O14647 AC099778.1-201ENST00000568593 1911 ntBASIC26.1■■□□□ 1.77
CHD2O14647 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD2O14647 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CHD2O14647 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
CHD2O14647 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC26.1■■□□□ 1.77
CHD2O14647 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC26.1■■□□□ 1.77
CHD2O14647 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
CHD2O14647 AL391422.3-201ENST00000603791 2761 ntBASIC26.1■■□□□ 1.77
CHD2O14647 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CHD2O14647 TREX1-205ENST00000625293 1783 ntBASIC26.1■■□□□ 1.77
CHD2O14647 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CHD2O14647 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC26.09■■□□□ 1.77
CHD2O14647 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC26.09■■□□□ 1.77
CHD2O14647 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC26.09■■□□□ 1.77
CHD2O14647 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC26.09■■□□□ 1.77
CHD2O14647 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
CHD2O14647 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 GGCT-205ENST00000409436 954 ntTSL 3 BASIC26.09■■□□□ 1.77
CHD2O14647 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC26.09■■□□□ 1.77
CHD2O14647 AC093909.1-201ENST00000504731 1122 ntBASIC26.09■■□□□ 1.77
CHD2O14647 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CHD2O14647 GABARAPL3-202ENST00000624044 1851 ntBASIC26.09■■□□□ 1.77
CHD2O14647 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC26.09■■□□□ 1.77
CHD2O14647 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD2O14647 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD2O14647 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CHD2O14647 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC26.08■■□□□ 1.77
CHD2O14647 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD2O14647 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CHD2O14647 TP73-202ENST00000354437 2140 ntTSL 5 BASIC26.08■■□□□ 1.77
CHD2O14647 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms