Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 ATP6V0CP3-201ENST00000417255 467 ntBASIC32.12■■■□□ 2.73
CUX2O14529 AC092910.1-201ENST00000482027 1129 ntBASIC32.12■■■□□ 2.73
CUX2O14529 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC32.12■■■□□ 2.73
CUX2O14529 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC32.12■■■□□ 2.73
CUX2O14529 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
CUX2O14529 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CUX2O14529 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 RPS2P1-201ENST00000434010 821 ntBASIC32.11■■■□□ 2.73
CUX2O14529 AC132008.2-207ENST00000454517 770 ntBASIC32.11■■■□□ 2.73
CUX2O14529 TAF8-206ENST00000472818 719 ntTSL 2 BASIC32.11■■■□□ 2.73
CUX2O14529 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 AC012640.2-201ENST00000561606 901 ntBASIC32.11■■■□□ 2.73
CUX2O14529 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC32.11■■■□□ 2.73
CUX2O14529 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC32.11■■■□□ 2.73
CUX2O14529 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
CUX2O14529 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
CUX2O14529 HLA-J-201ENST00000462773 1622 ntBASIC32.11■■■□□ 2.73
CUX2O14529 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
CUX2O14529 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC32.1■■■□□ 2.73
CUX2O14529 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CUX2O14529 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CUX2O14529 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC32.1■■■□□ 2.73
CUX2O14529 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
CUX2O14529 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC32.1■■■□□ 2.73
CUX2O14529 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC32.1■■■□□ 2.73
CUX2O14529 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC32.1■■■□□ 2.73
CUX2O14529 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC32.1■■■□□ 2.73
CUX2O14529 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CUX2O14529 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
CUX2O14529 AL023284.2-201ENST00000405850 579 ntBASIC32.1■■■□□ 2.73
CUX2O14529 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC32.1■■■□□ 2.73
CUX2O14529 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC32.1■■■□□ 2.73
CUX2O14529 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CUX2O14529 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CUX2O14529 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CUX2O14529 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
CUX2O14529 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CUX2O14529 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CUX2O14529 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
CUX2O14529 AC005034.1-201ENST00000426657 489 ntBASIC32.09■■■□□ 2.73
CUX2O14529 ALG1L5P-201ENST00000482043 771 ntBASIC32.09■■■□□ 2.73
CUX2O14529 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC32.09■■■□□ 2.73
CUX2O14529 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC32.09■■■□□ 2.73
CUX2O14529 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC32.09■■■□□ 2.73
CUX2O14529 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC32.09■■■□□ 2.73
CUX2O14529 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC32.08■■■□□ 2.73
CUX2O14529 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
CUX2O14529 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC32.08■■■□□ 2.73
CUX2O14529 AC007967.2-201ENST00000432613 625 ntBASIC32.08■■■□□ 2.73
CUX2O14529 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC32.08■■■□□ 2.73
CUX2O14529 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC32.08■■■□□ 2.73
CUX2O14529 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
CUX2O14529 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC32.07■■■□□ 2.73
CUX2O14529 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC32.07■■■□□ 2.72
CUX2O14529 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC32.07■■■□□ 2.72
CUX2O14529 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 CCS-201ENST00000310190 942 ntTSL 5 BASIC32.07■■■□□ 2.72
CUX2O14529 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC32.07■■■□□ 2.72
CUX2O14529 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC32.07■■■□□ 2.72
CUX2O14529 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC32.07■■■□□ 2.72
CUX2O14529 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC32.07■■■□□ 2.72
CUX2O14529 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CUX2O14529 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
CUX2O14529 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC32.06■■■□□ 2.72
CUX2O14529 AC023274.1-201ENST00000418278 595 ntBASIC32.06■■■□□ 2.72
CUX2O14529 MCCD1P2-201ENST00000423228 335 ntBASIC32.06■■■□□ 2.72
CUX2O14529 CRCP-205ENST00000431089 942 ntTSL 2 BASIC32.06■■■□□ 2.72
CUX2O14529 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC32.06■■■□□ 2.72
CUX2O14529 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC32.06■■■□□ 2.72
CUX2O14529 AC021087.4-201ENST00000563761 564 ntBASIC32.06■■■□□ 2.72
CUX2O14529 AC138761.1-201ENST00000584393 385 ntBASIC32.06■■■□□ 2.72
CUX2O14529 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
CUX2O14529 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC32.06■■■□□ 2.72
CUX2O14529 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC32.06■■■□□ 2.72
CUX2O14529 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CUX2O14529 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CUX2O14529 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC32.05■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms