Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM38O00635 AC092338.2-201ENST00000568827 1415 ntBASIC18.9■□□□□ 0.62
TRIM38O00635 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM38O00635 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM38O00635 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
TRIM38O00635 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM38O00635 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.89■□□□□ 0.62
TRIM38O00635 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM38O00635 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
TRIM38O00635 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM38O00635 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM38O00635 YBX1P2-201ENST00000489612 999 ntBASIC18.89■□□□□ 0.61
TRIM38O00635 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
TRIM38O00635 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
TRIM38O00635 LINC01238-205ENST00000567549 1107 ntBASIC18.89■□□□□ 0.61
TRIM38O00635 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM38O00635 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 AC010653.2-201ENST00000623505 997 ntBASIC18.89■□□□□ 0.61
TRIM38O00635 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM38O00635 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM38O00635 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM38O00635 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM38O00635 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 FAM8A6P-201ENST00000407496 1135 ntBASIC18.88■□□□□ 0.61
TRIM38O00635 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.88■□□□□ 0.61
TRIM38O00635 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM38O00635 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM38O00635 MYC-208ENST00000641036 567 ntBASIC18.88■□□□□ 0.61
TRIM38O00635 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM38O00635 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM38O00635 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRIM38O00635 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM38O00635 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM38O00635 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 TSPY5P-201ENST00000426936 936 ntBASIC18.87■□□□□ 0.61
TRIM38O00635 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.87■□□□□ 0.61
TRIM38O00635 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.87■□□□□ 0.61
TRIM38O00635 AL160286.2-201ENST00000567150 934 ntBASIC18.87■□□□□ 0.61
TRIM38O00635 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM38O00635 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM38O00635 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TRIM38O00635 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
TRIM38O00635 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM38O00635 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM38O00635 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM38O00635 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM38O00635 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM38O00635 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM38O00635 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM38O00635 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms