Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC28A1O00337 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.11■□□□□ 0.49
SLC28A1O00337 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 AL354751.1-201ENST00000412768 1863 ntBASIC18.11■□□□□ 0.49
SLC28A1O00337 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
SLC28A1O00337 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC28A1O00337 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC28A1O00337 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC28A1O00337 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC28A1O00337 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SLC28A1O00337 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC28A1O00337 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
SLC28A1O00337 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 MTMR9LP-203ENST00000426597 1545 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 HTR7P1-201ENST00000538670 1336 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC28A1O00337 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC28A1O00337 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.1■□□□□ 0.49
SLC28A1O00337 MYC-208ENST00000641036 567 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 AC073648.6-201ENST00000641589 218 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC28A1O00337 AC126763.1-201ENST00000552015 2118 ntBASIC18.1■□□□□ 0.49
SLC28A1O00337 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC28A1O00337 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC28A1O00337 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 AC007613.1-201ENST00000572811 2597 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC28A1O00337 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC28A1O00337 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC28A1O00337 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 AC004951.3-201ENST00000418645 1148 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 AL353807.1-201ENST00000427475 662 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 AC091390.4-202ENST00000476426 537 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 RPS2P4-201ENST00000476944 856 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.09■□□□□ 0.49
SLC28A1O00337 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SLC28A1O00337 AC006058.3-201ENST00000606217 1069 ntBASIC18.09■□□□□ 0.49
SLC28A1O00337 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC28A1O00337 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
SLC28A1O00337 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC28A1O00337 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SLC28A1O00337 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC28A1O00337 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC28A1O00337 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC28A1O00337 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SLC28A1O00337 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC28A1O00337 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC28A1O00337 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC28A1O00337 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC28A1O00337 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.08■□□□□ 0.49
SLC28A1O00337 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC28A1O00337 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC28A1O00337 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC28A1O00337 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SLC28A1O00337 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms