Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.39■□□□□ 0.53
EIF3FO00303 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.39■□□□□ 0.53
EIF3FO00303 KRT18P41-201ENST00000518924 1277 ntBASIC18.39■□□□□ 0.53
EIF3FO00303 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EIF3FO00303 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
EIF3FO00303 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EIF3FO00303 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EIF3FO00303 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
EIF3FO00303 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EIF3FO00303 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.39■□□□□ 0.53
EIF3FO00303 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
EIF3FO00303 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
EIF3FO00303 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.38■□□□□ 0.53
EIF3FO00303 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
EIF3FO00303 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.38■□□□□ 0.53
EIF3FO00303 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
EIF3FO00303 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.38■□□□□ 0.53
EIF3FO00303 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.38■□□□□ 0.53
EIF3FO00303 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 AIRN-201ENST00000601203 4374 ntBASIC18.38■□□□□ 0.53
EIF3FO00303 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
EIF3FO00303 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.38■□□□□ 0.53
EIF3FO00303 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
EIF3FO00303 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.38■□□□□ 0.53
EIF3FO00303 TSPY17P-201ENST00000450329 467 ntBASIC18.38■□□□□ 0.53
EIF3FO00303 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.38■□□□□ 0.53
EIF3FO00303 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.38■□□□□ 0.53
EIF3FO00303 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 AC008622.2-201ENST00000617006 1229 ntBASIC18.38■□□□□ 0.53
EIF3FO00303 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.38■□□□□ 0.53
EIF3FO00303 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.38■□□□□ 0.53
EIF3FO00303 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.38■□□□□ 0.53
EIF3FO00303 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
EIF3FO00303 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.37■□□□□ 0.53
EIF3FO00303 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
EIF3FO00303 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.37■□□□□ 0.53
EIF3FO00303 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.37■□□□□ 0.53
EIF3FO00303 MCCD1P1-208ENST00000445732 328 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.37■□□□□ 0.53
EIF3FO00303 AL023803.3-201ENST00000615559 522 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 KRT8P45-201ENST00000414328 1447 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 AC112777.1-201ENST00000540175 1423 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 AC079598.2-202ENST00000546624 1451 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.37■□□□□ 0.53
EIF3FO00303 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.37■□□□□ 0.53
EIF3FO00303 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
EIF3FO00303 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
EIF3FO00303 AC011270.2-201ENST00000624293 2550 ntBASIC18.37■□□□□ 0.53
EIF3FO00303 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
EIF3FO00303 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 AL023284.2-201ENST00000405850 579 ntBASIC18.36■□□□□ 0.53
EIF3FO00303 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 CCR12P-201ENST00000446203 998 ntBASIC18.36■□□□□ 0.53
EIF3FO00303 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EIF3FO00303 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.36■□□□□ 0.53
EIF3FO00303 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 AL357033.4-201ENST00000617703 1807 ntBASIC18.36■□□□□ 0.53
EIF3FO00303 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 AC120498.9-201ENST00000339021 3867 ntBASIC18.36■□□□□ 0.53
EIF3FO00303 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.36■□□□□ 0.53
EIF3FO00303 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms