Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX39AO00148 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.13■□□□□ 0.97
DDX39AO00148 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.13■□□□□ 0.97
DDX39AO00148 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
DDX39AO00148 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX39AO00148 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX39AO00148 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.13■□□□□ 0.97
DDX39AO00148 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.13■□□□□ 0.97
DDX39AO00148 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DDX39AO00148 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
DDX39AO00148 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
DDX39AO00148 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
DDX39AO00148 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC21.12■□□□□ 0.97
DDX39AO00148 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DDX39AO00148 KRT18P38-201ENST00000449496 1282 ntBASIC21.12■□□□□ 0.97
DDX39AO00148 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.12■□□□□ 0.97
DDX39AO00148 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
DDX39AO00148 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
DDX39AO00148 AC024243.1-201ENST00000609234 778 ntBASIC21.12■□□□□ 0.97
DDX39AO00148 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 AL031432.5-201ENST00000641059 760 ntBASIC21.12■□□□□ 0.97
DDX39AO00148 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
DDX39AO00148 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
DDX39AO00148 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
DDX39AO00148 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DDX39AO00148 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.11■□□□□ 0.97
DDX39AO00148 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
DDX39AO00148 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.11■□□□□ 0.97
DDX39AO00148 NEK4P2-201ENST00000580004 1012 ntBASIC21.11■□□□□ 0.97
DDX39AO00148 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 KRT8P32-201ENST00000512863 1461 ntBASIC21.11■□□□□ 0.97
DDX39AO00148 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX39AO00148 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.11■□□□□ 0.97
DDX39AO00148 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
DDX39AO00148 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
DDX39AO00148 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
DDX39AO00148 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 AP000523.1-201ENST00000398242 1049 ntBASIC21.1■□□□□ 0.97
DDX39AO00148 FAM8A6P-201ENST00000407496 1135 ntBASIC21.1■□□□□ 0.97
DDX39AO00148 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX39AO00148 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.1■□□□□ 0.97
DDX39AO00148 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.1■□□□□ 0.97
DDX39AO00148 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 LINC01238-205ENST00000567549 1107 ntBASIC21.1■□□□□ 0.97
DDX39AO00148 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
DDX39AO00148 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
DDX39AO00148 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DDX39AO00148 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.09■□□□□ 0.97
DDX39AO00148 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms