Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 UBQLN4P1-201ENST00000461599 1801 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KRT16P3-201ENST00000439127 1283 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 UNC93B8-201ENST00000511903 705 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MIR3621-201ENST00000580529 85 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AC233992.3-201ENST00000607491 485 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AC012354.3-201ENST00000623734 483 ntBASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
TMEM256-PLSCR3K7ERE1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.9□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms