Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AC073130.3-201ENST00000624389 2278 ntBASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
C1QTNF3-AMACRE9PGA6 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 KRT18P23-201ENST00000435622 1283 ntBASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SEC1P-202ENST00000473944 940 ntBASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AL136038.3-201ENST00000561909 1096 ntBASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC083849.1-201ENST00000615227 514 ntBASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC005332.1-201ENST00000577698 1310 ntBASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MIR564-202ENST00000385049 94 ntBASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HYMAI.1-201ENST00000620949 238 ntBASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC007952.6-201ENST00000573168 2673 ntBASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC003957.1-201ENST00000625108 2673 ntBASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.8■□□□□ 0.6
C1QTNF3-AMACRE9PGA6 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms