Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 RN7SL850P-201ENST00000579959 291 ntBASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 AL353708.3-201ENST00000610272 989 ntBASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPDYE4A6NLX3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDYE4A6NLX3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPDYE4A6NLX3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 UNC93B2-201ENST00000285383 730 ntBASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 AL391001.1-201ENST00000602747 715 ntBASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 MIR6786-201ENST00000616843 113 ntBASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 TREX1-205ENST00000625293 1783 ntBASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDYE4A6NLX3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 KRT8P36-201ENST00000489121 1440 ntBASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 ARMC10P1-201ENST00000313754 855 ntBASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 AC012306.2-201ENST00000609350 630 ntBASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDYE4A6NLX3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms