Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF222A6NCQ9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 AL591742.1-201ENST00000604433 565 ntBASIC15.28■□□□□ 0.04
RNF222A6NCQ9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF222A6NCQ9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC15.27■□□□□ 0.04
RNF222A6NCQ9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 FLJ13224-201ENST00000313737 1514 ntBASIC15.27■□□□□ 0.03
RNF222A6NCQ9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
RNF222A6NCQ9 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
RNF222A6NCQ9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms