Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC124864.1-201ENST00000623408 392 ntBASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 AC034236.2-201ENST00000606662 1610 ntBASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 NSUN5P1-202ENST00000421140 1535 ntBASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 NSUN5P2-203ENST00000457352 1529 ntBASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC163A0A0D9SF12 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.58■□□□□ 0.57
CCDC163A0A0D9SF12 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 MIR574-201ENST00000385209 96 ntBASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AF238378.1-201ENST00000526806 358 ntBASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AC009065.1-201ENST00000564055 1225 ntBASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AL773604.1-201ENST00000617417 272 ntBASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CCDC163A0A0D9SF12 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 KRT18P13-201ENST00000400056 1290 ntBASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 RNA5SP419-201ENST00000515908 135 ntBASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC163A0A0D9SF12 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 AF228730.7-201ENST00000641842 219 ntBASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC163A0A0D9SF12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 IL9RP2-201ENST00000423948 1312 ntBASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC163A0A0D9SF12 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms