Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRAV19A0A0A6YYK7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 RNF165-205ENST00000588679 2904 ntBASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV19A0A0A6YYK7 HOXB1-202ENST00000577092 1414 ntBASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV19A0A0A6YYK7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 AC104390.1-201ENST00000555663 520 ntBASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.41■□□□□ 0.7
TRAV19A0A0A6YYK7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 KRT18P48-201ENST00000434763 852 ntBASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV19A0A0A6YYK7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms