Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 HEIH-201ENST00000623091 1652 ntBASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 NIFKP9-201ENST00000419265 221 ntBASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 POU5F1P3-201ENST00000428824 1078 ntBASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV27A0A087WT01 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 BICD1-207ENST00000551848 1962 ntBASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 AC004980.1-204ENST00000429707 299 ntBASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 AC131212.4-201ENST00000623606 975 ntBASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV27A0A087WT01 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 HTR7P1-201ENST00000538670 1336 ntBASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AC128676.1-201ENST00000454392 318 ntBASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 RPS2P4-201ENST00000476944 856 ntBASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AP002982.1-201ENST00000492365 877 ntBASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AC090340.1-201ENST00000620778 4980 ntBASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TRAV27A0A087WT01 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms