Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 FP475955.4-201ENST00000623131 1990 ntBASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HLA-DRB4X5D2U9 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NOC2LP1-202ENST00000452600 2235 ntBASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AL161938.1-201ENST00000569833 2180 ntBASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 IRX1P1-201ENST00000438849 1838 ntBASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.17□□□□□ -0.14
HLA-DRB4X5D2U9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 MME-217ENST00000616757 1315 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 LTB4R2-202ENST00000528054 3092 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 RPS2P55-201ENST00000397318 883 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC004951.3-201ENST00000418645 1148 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 TSPY23P-201ENST00000440136 739 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC107956.1-201ENST00000494359 873 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC233702.5-201ENST00000584107 538 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ABBA01031674.1-201ENST00000635145 728 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 RCC2P6-201ENST00000526625 1557 ntBASIC14.16□□□□□ -0.14
HLA-DRB4X5D2U9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms