Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA4Q9Y5G9 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-206ENST00000376090 689 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-209ENST00000376096 565 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-210ENST00000376099 610 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-214ENST00000418507 726 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 ATP5G1P1-201ENST00000448724 379 ntBASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 C2orf69P3-201ENST00000565542 1120 ntBASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AC006011.2-201ENST00000621313 1158 ntBASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AP003400.6-201ENST00000624698 740 ntBASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 AL031985.4-201ENST00000642138 673 ntBASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA4Q9Y5G9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 ZNF815P-204ENST00000434898 1737 ntBASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 AL445675.2-201ENST00000620291 557 ntBASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA4Q9Y5G9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 AP000997.3-201ENST00000623333 2250 ntBASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGA4Q9Y5G9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 FSCN1P1-201ENST00000568912 1481 ntBASIC18.53■□□□□ 0.56
PCDHGA4Q9Y5G9 RN7SL832P-201ENST00000607781 1756 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms