Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 AC009947.2-201ENST00000444014 672 ntBASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHB9Q9Y5E1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 AC093458.2-201ENST00000623150 629 ntBASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 MYC-208ENST00000641036 567 ntBASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHB9Q9Y5E1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 PCED1CP-201ENST00000419887 785 ntBASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 AL023803.3-201ENST00000615559 522 ntBASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHB9Q9Y5E1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHB9Q9Y5E1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AL138966.2-201ENST00000621997 464 ntBASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AL031432.5-201ENST00000641059 760 ntBASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHB9Q9Y5E1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms