Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.17■□□□□ 0.66
CHMP2BQ9UQN3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 AP003097.1-201ENST00000530657 1135 ntBASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 MTDHP1-201ENST00000605323 784 ntBASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHMP2BQ9UQN3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 RNA5SP413-201ENST00000516373 109 ntBASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.15■□□□□ 0.66
CHMP2BQ9UQN3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.14■□□□□ 0.66
CHMP2BQ9UQN3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2BQ9UQN3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHMP2BQ9UQN3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.14■□□□□ 0.65
CHMP2BQ9UQN3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms