Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 CICP4-201ENST00000447359 2812 ntBASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PRDM4Q9UKN5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.39■□□□□ 0.7
PRDM4Q9UKN5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PRDM4Q9UKN5 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.39■□□□□ 0.7
PRDM4Q9UKN5 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
PRDM4Q9UKN5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PRDM4Q9UKN5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PRDM4Q9UKN5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 AC024909.3-201ENST00000611513 2257 ntBASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 AC055733.4-201ENST00000638462 1354 ntBASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PRDM4Q9UKN5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 AC005224.4-201ENST00000583262 1652 ntBASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PRDM4Q9UKN5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms