Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 MIR3180-5-201ENST00000583743 153 ntBASIC17.71■□□□□ 0.43
CTSFQ9UBX1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 AL512353.2-201ENST00000448759 1962 ntBASIC17.71■□□□□ 0.43
CTSFQ9UBX1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 RCC2P3-201ENST00000418112 1537 ntBASIC17.71■□□□□ 0.43
CTSFQ9UBX1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 AL020996.1-203ENST00000536896 2307 ntBASIC17.71■□□□□ 0.43
CTSFQ9UBX1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CTSFQ9UBX1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTSFQ9UBX1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CTSFQ9UBX1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 KRT18P38-201ENST00000449496 1282 ntBASIC17.7■□□□□ 0.42
CTSFQ9UBX1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
CTSFQ9UBX1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 AL031133.1-201ENST00000406807 723 ntBASIC17.69■□□□□ 0.42
CTSFQ9UBX1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.69■□□□□ 0.42
CTSFQ9UBX1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.68■□□□□ 0.42
CTSFQ9UBX1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CTSFQ9UBX1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms