Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC106820.2-201ENST00000563775 3264 ntBASIC16.03■□□□□ 0.16
COMMD9Q9P000 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD9Q9P000 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD9Q9P000 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 AL512353.2-201ENST00000448759 1962 ntBASIC16.02■□□□□ 0.16
COMMD9Q9P000 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 PHGDH-210ENST00000641115 1638 ntBASIC16.02■□□□□ 0.16
COMMD9Q9P000 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD9Q9P000 AL589743.5-201ENST00000616611 1050 ntBASIC16.02■□□□□ 0.16
COMMD9Q9P000 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD9Q9P000 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
COMMD9Q9P000 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COMMD9Q9P000 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.02■□□□□ 0.15
COMMD9Q9P000 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD9Q9P000 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.01■□□□□ 0.15
COMMD9Q9P000 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD9Q9P000 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD9Q9P000 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms