Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 MIR3180-5-201ENST00000583743 153 ntBASIC21.82■■□□□ 1.08
RBM28Q9NW13 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.82■■□□□ 1.08
RBM28Q9NW13 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBM28Q9NW13 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RBM28Q9NW13 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RBM28Q9NW13 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 AC087289.5-201ENST00000586076 3175 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 AL031598.1-201ENST00000561511 1773 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 Z98044.1-201ENST00000632503 1764 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 AC211429.1-201ENST00000415277 523 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 AL512604.3-201ENST00000569583 964 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 WWOX-216ENST00000569818 525 ntBASIC21.8■■□□□ 1.08
RBM28Q9NW13 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.8■■□□□ 1.08
RBM28Q9NW13 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBM28Q9NW13 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 LINC01023-201ENST00000606054 436 ntBASIC21.79■■□□□ 1.08
RBM28Q9NW13 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 CR769767.2-201ENST00000622735 460 ntBASIC21.79■■□□□ 1.08
RBM28Q9NW13 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RBM28Q9NW13 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RBM28Q9NW13 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 AL357033.4-201ENST00000617703 1807 ntBASIC21.78■■□□□ 1.08
RBM28Q9NW13 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 MIR564-202ENST00000385049 94 ntBASIC21.78■■□□□ 1.08
RBM28Q9NW13 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBM28Q9NW13 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.78■■□□□ 1.08
RBM28Q9NW13 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
RBM28Q9NW13 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
RBM28Q9NW13 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms