Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 AC073648.6-201ENST00000641589 218 ntBASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 BICD1-207ENST00000551848 1962 ntBASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.11■□□□□ 0.49
LRTM1Q9HBL6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AC090340.1-201ENST00000620778 4980 ntBASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRTM1Q9HBL6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 BCL2-203ENST00000589955 5011 ntBASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 AP002982.1-201ENST00000492365 877 ntBASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PRSS44-201ENST00000515154 1146 ntBASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 AC006058.3-201ENST00000606217 1069 ntBASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRTM1Q9HBL6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRTM1Q9HBL6 AC126763.1-201ENST00000552015 2118 ntBASIC18.08■□□□□ 0.49
LRTM1Q9HBL6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.08■□□□□ 0.49
LRTM1Q9HBL6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
LRTM1Q9HBL6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms