Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 CR392000.1-201ENST00000624770 1228 ntBASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 AC138932.1-201ENST00000534164 6830 ntBASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.1■□□□□ 0.49
LIN28AQ9H9Z2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 CD177P1-201ENST00000606252 935 ntBASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LIN28AQ9H9Z2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
LIN28AQ9H9Z2 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 TSPY15P-201ENST00000457163 923 ntBASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 C1QL1P1-201ENST00000568105 661 ntBASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 AP001412.1-201ENST00000608405 714 ntBASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIN28AQ9H9Z2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LIN28AQ9H9Z2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms