Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ABHD17AP1-201ENST00000358206 933 ntBASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 RPS2P55-201ENST00000397318 883 ntBASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 AC012618.2-201ENST00000428058 849 ntBASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 AC107956.1-201ENST00000494359 873 ntBASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC40Q9H9A6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 KRT8P32-201ENST00000512863 1461 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC009113.1-201ENST00000570267 2443 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AP000692.2-201ENST00000608391 879 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC090164.3-201ENST00000610780 2143 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC068587.9-201ENST00000641814 219 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 AC104581.1-202ENST00000635932 2618 ntBASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC40Q9H9A6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 NUDT16P1-203ENST00000513809 620 ntBASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 AC233702.5-201ENST00000584107 538 ntBASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LRRC40Q9H9A6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 AC116562.2-201ENST00000507042 360 ntBASIC19.09■□□□□ 0.65
LRRC40Q9H9A6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms