Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC27.99■■■□□ 2.07
SCAF1Q9H7N4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 PWWP2AP1-201ENST00000429776 2273 ntBASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 HIST1H2APS4-201ENST00000362070 348 ntBASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 AC093484.2-201ENST00000580996 2166 ntBASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC27.98■■■□□ 2.07
SCAF1Q9H7N4 AC004870.1-201ENST00000315132 882 ntBASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 ANKRD20A18P-201ENST00000359341 492 ntBASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 AC130371.2-201ENST00000619443 611 ntBASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 AL138781.2-201ENST00000617896 1843 ntBASIC27.97■■■□□ 2.07
SCAF1Q9H7N4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 VENTXP5-201ENST00000523979 775 ntBASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 PRELID1P1-202ENST00000567272 903 ntBASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
SCAF1Q9H7N4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC27.95■■■□□ 2.07
SCAF1Q9H7N4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SCAF1Q9H7N4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SCAF1Q9H7N4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
SCAF1Q9H7N4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC27.94■■■□□ 2.06
SCAF1Q9H7N4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC27.94■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms