Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.93■■□□□ 1.1
SH2D4AQ9H788 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
SH2D4AQ9H788 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH2D4AQ9H788 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH2D4AQ9H788 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SH2D4AQ9H788 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 KRT8P7-201ENST00000533003 1432 ntBASIC21.92■■□□□ 1.1
SH2D4AQ9H788 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SH2D4AQ9H788 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 ENSA-205ENST00000361532 792 ntTSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 SEC1P-202ENST00000473944 940 ntBASIC21.91■■□□□ 1.1
SH2D4AQ9H788 KRT18P56-201ENST00000507275 550 ntBASIC21.91■■□□□ 1.1
SH2D4AQ9H788 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SH2D4AQ9H788 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SH2D4AQ9H788 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.9■■□□□ 1.1
SH2D4AQ9H788 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.1
SH2D4AQ9H788 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 AL645929.1-201ENST00000420084 975 ntBASIC21.89■■□□□ 1.09
SH2D4AQ9H788 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SH2D4AQ9H788 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SH2D4AQ9H788 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms