Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 AC067852.2-201ENST00000590513 2313 ntBASIC17.98■□□□□ 0.47
PIF1Q9H611 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 HLA-L-209ENST00000420110 1011 ntBASIC17.98■□□□□ 0.47
PIF1Q9H611 AC069152.1-201ENST00000438030 544 ntBASIC17.98■□□□□ 0.47
PIF1Q9H611 AC097658.1-201ENST00000475555 843 ntBASIC17.98■□□□□ 0.47
PIF1Q9H611 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.98■□□□□ 0.47
PIF1Q9H611 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.98■□□□□ 0.47
PIF1Q9H611 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.98■□□□□ 0.47
PIF1Q9H611 AL121906.2-201ENST00000621597 723 ntBASIC17.98■□□□□ 0.47
PIF1Q9H611 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
PIF1Q9H611 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PIF1Q9H611 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PIF1Q9H611 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.98■□□□□ 0.47
PIF1Q9H611 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.97■□□□□ 0.47
PIF1Q9H611 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 AC092368.3-202ENST00000574180 1591 ntBASIC17.97■□□□□ 0.47
PIF1Q9H611 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.97■□□□□ 0.47
PIF1Q9H611 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.97■□□□□ 0.47
PIF1Q9H611 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PIF1Q9H611 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 MYC-209ENST00000641252 345 ntBASIC17.97■□□□□ 0.47
PIF1Q9H611 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
PIF1Q9H611 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.97■□□□□ 0.47
PIF1Q9H611 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PIF1Q9H611 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PIF1Q9H611 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 NOC2LP2-201ENST00000407594 1944 ntBASIC17.96■□□□□ 0.47
PIF1Q9H611 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 TUBB8P6-201ENST00000436895 1288 ntBASIC17.96■□□□□ 0.47
PIF1Q9H611 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.96■□□□□ 0.47
PIF1Q9H611 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PIF1Q9H611 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
PIF1Q9H611 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PIF1Q9H611 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PIF1Q9H611 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PIF1Q9H611 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PIF1Q9H611 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.46
PIF1Q9H611 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms