Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CCDC68Q9H2F9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 AC004980.1-204ENST00000429707 299 ntBASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 RPS2P4-201ENST00000476944 856 ntBASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 CR392000.1-201ENST00000624770 1228 ntBASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 AL031985.4-201ENST00000642138 673 ntBASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC68Q9H2F9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 AL135905.2-201ENST00000584934 1404 ntBASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 AC073195.1-201ENST00000607241 877 ntBASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC68Q9H2F9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 CROCCP3-202ENST00000420820 1947 ntBASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 AC142381.4-202ENST00000563973 229 ntBASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 AF186192.3-201ENST00000583427 947 ntBASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC68Q9H2F9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms