Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 AL160286.2-201ENST00000567150 934 ntBASIC19.62■□□□□ 0.73
DDX47Q9H0S4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
DDX47Q9H0S4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 AL162741.1-201ENST00000565563 1558 ntBASIC19.61■□□□□ 0.73
DDX47Q9H0S4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 SLC29A4P1-201ENST00000398760 971 ntBASIC19.61■□□□□ 0.73
DDX47Q9H0S4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.61■□□□□ 0.73
DDX47Q9H0S4 HLA-A-209ENST00000638375 975 ntBASIC19.61■□□□□ 0.73
DDX47Q9H0S4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
DDX47Q9H0S4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 AC008764.6-201ENST00000595909 2069 ntBASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 MIR4758-201ENST00000577688 71 ntBASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 AC008687.6-201ENST00000596318 630 ntBASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 AL137784.2-201ENST00000607332 1000 ntBASIC19.6■□□□□ 0.73
DDX47Q9H0S4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
DDX47Q9H0S4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 TSPY6P-201ENST00000448518 926 ntBASIC19.59■□□□□ 0.73
DDX47Q9H0S4 AC083880.1-201ENST00000608266 535 ntBASIC19.59■□□□□ 0.73
DDX47Q9H0S4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
DDX47Q9H0S4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms