Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 KRT18P6-201ENST00000555540 1265 ntBASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 AC068587.9-201ENST00000641814 219 ntBASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PACSIN1Q9BY11 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AC004980.1-204ENST00000429707 299 ntBASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AL445675.2-201ENST00000620291 557 ntBASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PACSIN1Q9BY11 AC068880.1-201ENST00000507289 2297 ntBASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
PACSIN1Q9BY11 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PACSIN1Q9BY11 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 RPS2P4-201ENST00000476944 856 ntBASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 RN7SL471P-201ENST00000580476 299 ntBASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 AC073648.6-201ENST00000641589 218 ntBASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 ABALON-201ENST00000629058 1903 ntBASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 PCDHB18P-201ENST00000524813 2368 ntBASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PACSIN1Q9BY11 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms