Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PCGF1Q9BSM1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 AC012306.2-201ENST00000609350 630 ntBASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 AC005363.2-201ENST00000618631 242 ntBASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 AC007613.1-201ENST00000572811 2597 ntBASIC15.78■□□□□ 0.12
PCGF1Q9BSM1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 LTB4R2-202ENST00000528054 3092 ntBASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 AC005332.8-201ENST00000622750 2735 ntBASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.77■□□□□ 0.12
PCGF1Q9BSM1 Z82202.1-201ENST00000623446 1880 ntBASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PCGF1Q9BSM1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PCGF1Q9BSM1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PCGF1Q9BSM1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms