Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 KRT8P11-201ENST00000409686 1436 ntBASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPPED1Q9BRF8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPPED1Q9BRF8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPPED1Q9BRF8 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CPPED1Q9BRF8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPPED1Q9BRF8 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPPED1Q9BRF8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 KRT8P32-201ENST00000512863 1461 ntBASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPPED1Q9BRF8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AC008764.6-201ENST00000595909 2069 ntBASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AC104771.1-201ENST00000603335 964 ntBASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.69■□□□□ 0.42
CPPED1Q9BRF8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 AC067852.2-201ENST00000590513 2313 ntBASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 AC069544.1-201ENST00000609399 999 ntBASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CPPED1Q9BRF8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms