Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
VGLL1Q99990 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.28□□□□□ -0.12
VGLL1Q99990 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VGLL1Q99990 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
VGLL1Q99990 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 HTR7P1-202ENST00000624664 4411 ntBASIC14.28□□□□□ -0.12
VGLL1Q99990 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
VGLL1Q99990 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
VGLL1Q99990 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
VGLL1Q99990 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
VGLL1Q99990 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
VGLL1Q99990 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.27□□□□□ -0.12
VGLL1Q99990 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
VGLL1Q99990 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.27□□□□□ -0.12
VGLL1Q99990 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
VGLL1Q99990 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.27□□□□□ -0.13
VGLL1Q99990 AC098934.4-201ENST00000564127 592 ntBASIC14.27□□□□□ -0.13
VGLL1Q99990 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 AC008687.6-201ENST00000596318 630 ntBASIC14.27□□□□□ -0.13
VGLL1Q99990 AC083880.1-201ENST00000608266 535 ntBASIC14.27□□□□□ -0.13
VGLL1Q99990 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.27□□□□□ -0.13
VGLL1Q99990 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC14.27□□□□□ -0.13
VGLL1Q99990 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.27□□□□□ -0.13
VGLL1Q99990 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.13
VGLL1Q99990 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
VGLL1Q99990 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.26□□□□□ -0.13
VGLL1Q99990 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 PKD1P1-201ENST00000458669 6805 ntBASIC14.26□□□□□ -0.13
VGLL1Q99990 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
VGLL1Q99990 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
VGLL1Q99990 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.26□□□□□ -0.13
VGLL1Q99990 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.26□□□□□ -0.13
VGLL1Q99990 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC14.26□□□□□ -0.13
VGLL1Q99990 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.26□□□□□ -0.13
VGLL1Q99990 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
VGLL1Q99990 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
VGLL1Q99990 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms