Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 FLJ13224-201ENST00000313737 1514 ntBASIC12.53□□□□□ -0.4
LITAFQ99732 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
LITAFQ99732 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LITAFQ99732 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LITAFQ99732 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC12.53□□□□□ -0.4
LITAFQ99732 UBE2DNL-204ENST00000602536 740 ntBASIC12.53□□□□□ -0.4
LITAFQ99732 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LITAFQ99732 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC12.53□□□□□ -0.4
LITAFQ99732 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LITAFQ99732 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LITAFQ99732 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LITAFQ99732 AP001094.4-201ENST00000579008 2176 ntBASIC12.52□□□□□ -0.4
LITAFQ99732 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
LITAFQ99732 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
LITAFQ99732 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
LITAFQ99732 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 TERF1P5-201ENST00000477545 1207 ntBASIC12.52□□□□□ -0.41
LITAFQ99732 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC12.52□□□□□ -0.41
LITAFQ99732 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 LINC02228-203ENST00000641970 1355 ntBASIC12.52□□□□□ -0.41
LITAFQ99732 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 KRT8P8-201ENST00000434750 1448 ntBASIC12.52□□□□□ -0.41
LITAFQ99732 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.52□□□□□ -0.41
LITAFQ99732 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LITAFQ99732 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LITAFQ99732 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LITAFQ99732 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LITAFQ99732 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LITAFQ99732 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms