Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AC092667.1-201ENST00000434301 2586 ntBASIC20.17■□□□□ 0.82
YME1L1Q96TA2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AL109659.2-201ENST00000606809 1674 ntBASIC20.17■□□□□ 0.82
YME1L1Q96TA2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AC074051.2-201ENST00000565115 352 ntBASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 AL137060.1-201ENST00000618151 2648 ntBASIC20.17■□□□□ 0.82
YME1L1Q96TA2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
YME1L1Q96TA2 RCC2P3-201ENST00000418112 1537 ntBASIC20.17■□□□□ 0.82
YME1L1Q96TA2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 RNF165-205ENST00000588679 2904 ntBASIC20.16■□□□□ 0.82
YME1L1Q96TA2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 AP002469.2-201ENST00000531724 424 ntBASIC20.16■□□□□ 0.82
YME1L1Q96TA2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
YME1L1Q96TA2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 AL662844.1-201ENST00000546340 181 ntBASIC20.15■□□□□ 0.82
YME1L1Q96TA2 AC104390.1-201ENST00000555663 520 ntBASIC20.15■□□□□ 0.82
YME1L1Q96TA2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 LINC00167-201ENST00000530583 1419 ntBASIC20.15■□□□□ 0.82
YME1L1Q96TA2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 TCF3P1-201ENST00000423021 1937 ntBASIC20.15■□□□□ 0.82
YME1L1Q96TA2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 AC008556.1-201ENST00000610908 2040 ntBASIC20.15■□□□□ 0.82
YME1L1Q96TA2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
YME1L1Q96TA2 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YME1L1Q96TA2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms