Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB3IPQ96QF0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 AL139246.5-201ENST00000606645 996 ntBASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RAB3IPQ96QF0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 SDHAP1-207ENST00000440850 2000 ntBASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 KRT18P20-201ENST00000548986 1279 ntBASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB3IPQ96QF0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 EDA-201ENST00000338901 1233 ntBASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB3IPQ96QF0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
RAB3IPQ96QF0 AL139384.1-201ENST00000612143 3047 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms