Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NEDD4LQ96PU5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.64■□□□□ 0.26
NEDD4LQ96PU5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEDD4LQ96PU5 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
NEDD4LQ96PU5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 AC134043.2-201ENST00000624206 2238 ntBASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 AC007322.1-201ENST00000426983 750 ntBASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 KRT18P5-201ENST00000436075 1291 ntBASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
NEDD4LQ96PU5 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 BID-214ENST00000617586 542 ntTSL 5 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 AC011270.2-201ENST00000624293 2550 ntBASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
NEDD4LQ96PU5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NEDD4LQ96PU5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms