Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AL138966.2-201ENST00000621997 464 ntBASIC19.38■□□□□ 0.69
RPRD1AQ96P16 CR769767.2-201ENST00000622735 460 ntBASIC19.38■□□□□ 0.69
RPRD1AQ96P16 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AC141257.4-201ENST00000634557 245 ntBASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AC136944.6-201ENST00000634818 245 ntBASIC19.38■□□□□ 0.69
RPRD1AQ96P16 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.38■□□□□ 0.69
RPRD1AQ96P16 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 AC036111.1-201ENST00000533973 1582 ntBASIC19.37■□□□□ 0.69
RPRD1AQ96P16 KRT8P32-201ENST00000512863 1461 ntBASIC19.37■□□□□ 0.69
RPRD1AQ96P16 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPRD1AQ96P16 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 MIR3180-5-201ENST00000583743 153 ntBASIC19.36■□□□□ 0.69
RPRD1AQ96P16 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPRD1AQ96P16 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPRD1AQ96P16 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms